Where did you get to with this? Did you try not using the auto light sensor and turning them on / off? (I'm not sure it's clear where you got too) - the only problem that I had was that rats ate the wiring out of the my driver side headlight (and part of the box) - did a bit of splicing, and got it back.
/wrt it being a pain - just get used to dropping the skirt -it just adds about 10-20 minutes on either side, and once you do it a bunch of times - it gets fast.